Описание
Security update for openbabel
This update for openbabel fixes the following issues:
Changes in openbabel:
- Update to version 3.2.0:
- Add an L-BFGS optimizer, used by default for gen3d and conformer searches
- New macrocycle ring builder (Dale codes) for better initial 3D geometry of large rings
- Add KET (Ketcher JSON) and ChemicalJSON (.cjson) format support
- Drop Python 2 support; Python 3.13 supported
- Faster, vectorized distance-geometry implementation
- Full CMake 4 compatibility and modernized build
- Backwards compatible with 3.0 and 3.1
- Fix many crash and memory-safety bugs found via OSS-Fuzz and TALOS, including the following security issues: CVE-2022-37331 (boo#1217676), CVE-2022-41793, CVE-2022-42885, CVE-2022-43467, CVE-2022-43607, CVE-2022-44451, CVE-2022-46280, CVE-2022-46289, CVE-2022-46290, CVE-2022-46291, CVE-2022-46292, CVE-2022-46294, CVE-2022-46295, CVE-2025-10994, CVE-2025-10995, CVE-2025-10996, CVE-2025-10997, CVE-2025-10998, CVE-2025-10999, CVE-2025-11000, CVE-2026-2704 (boo#1258501), CVE-2026-2705 (boo#1258507) and CVE-2026-3408 (boo#1259041)
Список пакетов
openSUSE Leap 16.0
Ссылки
- SUSE Security Ratings
- SUSE Bug 1217676
- SUSE Bug 1258501
- SUSE Bug 1258507
- SUSE Bug 1259041
- SUSE CVE CVE-2022-37331 page
- SUSE CVE CVE-2022-41793 page
- SUSE CVE CVE-2022-42885 page
- SUSE CVE CVE-2022-43467 page
- SUSE CVE CVE-2022-43607 page
- SUSE CVE CVE-2022-44451 page
- SUSE CVE CVE-2022-46280 page
- SUSE CVE CVE-2022-46289 page
- SUSE CVE CVE-2022-46290 page
- SUSE CVE CVE-2022-46291 page
- SUSE CVE CVE-2022-46292 page
- SUSE CVE CVE-2022-46294 page
- SUSE CVE CVE-2022-46295 page
- SUSE CVE CVE-2025-10994 page
- SUSE CVE CVE-2025-10995 page
Описание
An out-of-bounds write vulnerability exists in the Gaussian format orientation functionality of Open Babel 3.1.1 and master commit 530dbfa3. A specially crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.
Затронутые продукты
Ссылки
- CVE-2022-37331
- SUSE Bug 1217676
Описание
An out-of-bounds write vulnerability exists in the CSR format title functionality of Open Babel 3.1.1 and master commit 530dbfa3. A specially crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.
Затронутые продукты
Ссылки
- CVE-2022-41793
Описание
A use of uninitialized pointer vulnerability exists in the GRO format res functionality of Open Babel 3.1.1 and master commit 530dbfa3. A specially crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.
Затронутые продукты
Ссылки
- CVE-2022-42885
Описание
An out-of-bounds write vulnerability exists in the PQS format coord_file functionality of Open Babel 3.1.1 and master commit 530dbfa3. A specially crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.
Затронутые продукты
Ссылки
- CVE-2022-43467
Описание
An out-of-bounds write vulnerability exists in the MOL2 format attribute and value functionality of Open Babel 3.1.1 and master commit 530dbfa3. A specially crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.
Затронутые продукты
Ссылки
- CVE-2022-43607
Описание
A use of uninitialized pointer vulnerability exists in the MSI format atom functionality of Open Babel 3.1.1 and master commit 530dbfa3. A specially crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.
Затронутые продукты
Ссылки
- CVE-2022-44451
Описание
A use of uninitialized pointer vulnerability exists in the PQS format pFormat functionality of Open Babel 3.1.1 and master commit 530dbfa3. A specially crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.
Затронутые продукты
Ссылки
- CVE-2022-46280
Описание
Multiple out-of-bounds write vulnerabilities exist in the ORCA format nAtoms functionality of Open Babel 3.1.1 and master commit 530dbfa3. A specially-crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.nAtoms calculation wrap-around, leading to a small buffer allocation
Затронутые продукты
Ссылки
- CVE-2022-46289
Описание
Multiple out-of-bounds write vulnerabilities exist in the ORCA format nAtoms functionality of Open Babel 3.1.1 and master commit 530dbfa3. A specially-crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.The loop that stores the coordinates does not check its index against nAtoms
Затронутые продукты
Ссылки
- CVE-2022-46290
Описание
Multiple out-of-bounds write vulnerabilities exist in the translationVectors parsing functionality in multiple supported formats of Open Babel 3.1.1 and master commit 530dbfa3. A specially-crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.This vulnerability affects the MSI file format
Затронутые продукты
Ссылки
- CVE-2022-46291
Описание
Multiple out-of-bounds write vulnerabilities exist in the translationVectors parsing functionality in multiple supported formats of Open Babel 3.1.1 and master commit 530dbfa3. A specially-crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.This vulnerability affects the MOPAC file format, inside the Unit Cell Translation section
Затронутые продукты
Ссылки
- CVE-2022-46292
Описание
Multiple out-of-bounds write vulnerabilities exist in the translationVectors parsing functionality in multiple supported formats of Open Babel 3.1.1 and master commit 530dbfa3. A specially-crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.This vulnerability affects the MOPAC Cartesian file format
Затронутые продукты
Ссылки
- CVE-2022-46294
Описание
Multiple out-of-bounds write vulnerabilities exist in the translationVectors parsing functionality in multiple supported formats of Open Babel 3.1.1 and master commit 530dbfa3. A specially-crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability.This vulnerability affects the Gaussian file format
Затронутые продукты
Ссылки
- CVE-2022-46295
Описание
A weakness has been identified in Open Babel up to 3.1.1. This affects the function GAMESSOutputFormat::ReadMolecule of the file gamessformat.cpp. This manipulation causes use after free. It is possible to launch the attack on the local host. The exploit has been made available to the public and could be exploited.
Затронутые продукты
Ссылки
- CVE-2025-10994
- SUSE Bug 1250542
Описание
A security vulnerability has been detected in Open Babel up to 3.1.1. This vulnerability affects the function zlib_stream::basic_unzip_streambuf::underflow in the library /src/zipstreamimpl.h. Such manipulation leads to memory corruption. Local access is required to approach this attack. The exploit has been disclosed publicly and may be used.
Затронутые продукты
Ссылки
- CVE-2025-10995
- SUSE Bug 1250543
Описание
A vulnerability was detected in Open Babel up to 3.1.1. This issue affects the function OBSmilesParser::ParseSmiles of the file /src/formats/smilesformat.cpp. Performing manipulation results in heap-based buffer overflow. The attack needs to be approached locally. The exploit is now public and may be used.
Затронутые продукты
Ссылки
- CVE-2025-10996
- SUSE Bug 1250544
Описание
A flaw has been found in Open Babel up to 3.1.1. Impacted is the function ChemKinFormat::CheckSpecies of the file /src/formats/chemkinformat.cpp. Executing manipulation can lead to heap-based buffer overflow. The attack can only be executed locally. The exploit has been published and may be used.
Затронутые продукты
Ссылки
- CVE-2025-10997
- SUSE Bug 1250545
Описание
A vulnerability has been found in Open Babel up to 3.1.1. The affected element is the function ChemKinFormat::ReadReactionQualifierLines of the file /src/formats/chemkinformat.cpp. The manipulation leads to null pointer dereference. The attack can only be performed from a local environment. The exploit has been disclosed to the public and may be used.
Затронутые продукты
Ссылки
- CVE-2025-10998
- SUSE Bug 1250546
Описание
A vulnerability was found in Open Babel up to 3.1.1. The impacted element is the function CacaoFormat::SetHilderbrandt of the file /src/formats/cacaoformat.cpp. The manipulation results in null pointer dereference. The attack is only possible with local access. The exploit has been made public and could be used.
Затронутые продукты
Ссылки
- CVE-2025-10999
- SUSE Bug 1250547
Описание
A vulnerability was determined in Open Babel up to 3.1.1. This affects the function PQSFormat::ReadMolecule of the file /src/formats/PQSformat.cpp. This manipulation causes null pointer dereference. The attack is restricted to local execution. The exploit has been publicly disclosed and may be utilized.
Затронутые продукты
Ссылки
- CVE-2025-11000
- SUSE Bug 1250549
Описание
A security vulnerability has been detected in Open Babel up to 3.1.1. The affected element is the function OpenBabel::transform3d::DescribeAsString of the file src/math/transform3d.cpp of the component CIF File Handler. The manipulation leads to out-of-bounds read. It is possible to initiate the attack remotely. The exploit has been disclosed publicly and may be used. Upgrading to version 3.2.0 is sufficient to fix this issue. The identifier of the patch is e23a224b8fd9d7c2a7cde9ef4ec6afb4c05aa08a. It is suggested to install a patch to address this issue.
Затронутые продукты
Ссылки
- CVE-2026-2704
- SUSE Bug 1258501
Описание
A vulnerability was detected in Open Babel up to 3.1.1. The impacted element is the function OBAtom::SetFormalCharge in the library include/openbabel/atom.h of the component MOL2 File Handler. The manipulation results in out-of-bounds read. It is possible to launch the attack remotely. The exploit is now public and may be used. The patch is identified as e23a224b8fd9d7c2a7cde9ef4ec6afb4c05aa08a. A patch should be applied to remediate this issue. The project was informed of the problem early through an issue report but has not responded yet.
Затронутые продукты
Ссылки
- CVE-2026-2705
- SUSE Bug 1258507
Описание
A vulnerability was identified in Open Babel up to 3.1.1. This impacts the function OBAtom::GetExplicitValence of the file isrc/atom.cpp of the component CDXML File Handler. Such manipulation leads to null pointer dereference. The attack can be launched remotely. The exploit is publicly available and might be used. The name of the patch is e23a224b8fd9d7c2a7cde9ef4ec6afb4c05aa08a. It is best practice to apply a patch to resolve this issue.
Затронутые продукты
Ссылки
- CVE-2026-3408
- SUSE Bug 1259041